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  5. Solyc02g036390

Solyc02g036390


Description : LOW QUALITY:Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** B9MWW8_POPTR)


Gene families : OG_42_0000452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g036390
Cluster HCCA clusters: Cluster_305

Target Alias Description ECC score Gene Family Method Actions
Seita.4G097300.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0008175 tRNA methyltransferase activity IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Predicted GO
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
BP GO:0030488 tRNA methylation IEP Predicted GO
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0034708 methyltransferase complex IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
CC GO:0043527 tRNA methyltransferase complex IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001849 PH_domain 16 121
IPR000408 Reg_chr_condens 288 336
IPR000408 Reg_chr_condens 552 601
IPR000408 Reg_chr_condens 456 500
IPR000408 Reg_chr_condens 389 438
IPR000306 Znf_FYVE 609 671
No external refs found!