Sopen03g038900


Description : HCO3- transporter family


Gene families : OG_42_0000732 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000732_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g038900
Cluster HCCA clusters: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
104444 No alias HCO3- transporter family 0.01 Orthogroups_2024-Update
A4A49_19376 No alias boron transporter 1 0.04 Orthogroups_2024-Update
Glyma.15G011200 No alias HCO3- transporter family 0.01 Orthogroups_2024-Update
Glyma.17G207700 No alias HCO3- transporter family 0.02 Orthogroups_2024-Update
Glyma.19G219500 No alias HCO3- transporter family 0.04 Orthogroups_2024-Update
LOC_Os01g08020 No alias boron transporter protein, putative, expressed 0.03 Orthogroups_2024-Update
Mp6g01490.1 No alias borate transporter (BOR) 0.02 Orthogroups_2024-Update
PSME_00029576-RA No alias (at2g47160 : 1022.0) Boron transporter. Protein... 0.02 Orthogroups_2024-Update
PSME_00031872-RA No alias (at1g15460 : 660.0) Encodes a efflux-type boron... 0.02 Orthogroups_2024-Update
Potri.002G191000 No alias HCO3- transporter family 0.03 Orthogroups_2024-Update
Potri.012G081800 No alias HCO3- transporter family 0.03 Orthogroups_2024-Update
Potri.018G031700 No alias HCO3- transporter family 0.02 Orthogroups_2024-Update
Seita.5G124100.1 No alias borate transporter *(BOR) 0.03 Orthogroups_2024-Update
Solyc01g079150 No alias Boron transporter (AHRD V3.3 *** B6V758_VITVI) 0.07 Orthogroups_2024-Update
Solyc03g120020 No alias Boron transporter, putative (AHRD V3.3 *** A0A061G9M0_THECC) 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006820 anion transport IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011531 HCO3_transpt_C 4 181
IPR011531 HCO3_transpt_C 457 547
IPR011531 HCO3_transpt_C 202 375
No external refs found!