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  5. Sopen03g039670

Sopen03g039670


Description : TCP-1/cpn60 chaperonin family


Gene families : OG_42_0000358 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000358_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g039670
Cluster HCCA clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
405358 No alias heat shock protein 60 0.04 Orthogroups_2024-Update
A4A49_39526 No alias chaperonin 60 subunit beta 4, chloroplastic 0.02 Orthogroups_2024-Update
At2g28000 No alias SLP [Source:UniProtKB/TrEMBL;Acc:A0A178VZW6] 0.05 Orthogroups_2024-Update
At2g33210 No alias Chaperonin CPN60-like 1, mitochondrial... 0.06 Orthogroups_2024-Update
At3g13470 No alias Chaperonin 60 subunit beta 2, chloroplastic... 0.04 Orthogroups_2024-Update
At3g13860 No alias Chaperonin CPN60-like 2, mitochondrial... 0.05 Orthogroups_2024-Update
At3g23990 No alias Chaperonin CPN60, mitochondrial... 0.03 Orthogroups_2024-Update
At5g18820 No alias Chaperonin 60 subunit alpha 2, chloroplastic... 0.03 Orthogroups_2024-Update
Bradi1g50270 No alias chaperonin 60 beta 0.03 Orthogroups_2024-Update
Bradi4g38090 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Brara.B00789.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.02 Orthogroups_2024-Update
Brara.C01696.1 No alias chaperone *(Hsp60) 0.03 Orthogroups_2024-Update
Brara.C03496.1 No alias chaperone *(Hsp60) 0.02 Orthogroups_2024-Update
Brara.E01070.1 No alias chaperone *(Hsp60) 0.05 Orthogroups_2024-Update
Brara.E01461.1 No alias chaperone *(Hsp60) & subunit beta of Cpn60 chaperonin... 0.03 Orthogroups_2024-Update
Brara.G01341.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.07 Orthogroups_2024-Update
Cre06.g309100 No alias heat shock protein 60 0.01 Orthogroups_2024-Update
Cre07.g339150 No alias TCP-1/cpn60 chaperonin family protein 0.01 Orthogroups_2024-Update
Cre17.g741450 No alias chaperonin 60 beta 0.02 Orthogroups_2024-Update
GRMZM2G074790 No alias heat shock protein 60-3A 0.02 Orthogroups_2024-Update
GRMZM2G434173 No alias chaperonin-60alpha 0.02 Orthogroups_2024-Update
Glyma.08G175900 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Glyma.11G195900 No alias chaperonin-60alpha 0.04 Orthogroups_2024-Update
Glyma.12G078100 No alias chaperonin-60alpha 0.02 Orthogroups_2024-Update
Glyma.15G250500 No alias TCP-1/cpn60 chaperonin family protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G038680.8 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G000180.2 No alias chaperone *(Hsp60) & subunit beta of CPN60 assembly... 0.01 Orthogroups_2024-Update
Kfl00076_0150 kfl00076_0150_v1.... (p08927|rubb_pea : 851.0) RuBisCO large subunit-binding... 0.03 Orthogroups_2024-Update
MA_10436772g0010 No alias (p08926|ruba_pea : 701.0) RuBisCO large subunit-binding... 0.03 Orthogroups_2024-Update
MA_97627g0010 No alias (p08927|rubb_pea : 646.0) RuBisCO large subunit-binding... 0.03 Orthogroups_2024-Update
Mp6g16880.1 No alias chaperone (Hsp60) 0.03 Orthogroups_2024-Update
PSME_00000058-RA No alias (at3g13470 : 709.0) TCP-1/cpn60 chaperonin family... 0.02 Orthogroups_2024-Update
PSME_00016110-RA No alias (p08926|ruba_pea : 852.0) RuBisCO large subunit-binding... 0.02 Orthogroups_2024-Update
Potri.002G252900 No alias heat shock protein 60 0.03 Orthogroups_2024-Update
Potri.004G213400 No alias chaperonin-60alpha 0.03 Orthogroups_2024-Update
Potri.010G135100 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Pp1s149_289V6 No alias -like atpase 0.02 Orthogroups_2024-Update
Pp1s15_485V6 No alias ru large subunit-binding protein subunit beta 0.03 Orthogroups_2024-Update
Pp1s276_75V6 No alias ru large subunit-binding protein subunit beta 0.03 Orthogroups_2024-Update
Pp1s52_245V6 No alias -like atpase 0.02 Orthogroups_2024-Update
Seita.3G283900.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.05 Orthogroups_2024-Update
Seita.4G010900.1 No alias chaperone *(Hsp60) & subunit beta of Cpn60 chaperonin... 0.05 Orthogroups_2024-Update
Seita.9G231400.1 No alias chaperone *(Hsp60) 0.02 Orthogroups_2024-Update
Sobic.001G437801.1 No alias subunit beta of CPN60 assembly chaperone heterodimer &... 0.03 Orthogroups_2024-Update
Sobic.009G098100.1 No alias subunit alpha of Cpn60 chaperonin complex & subunit... 0.04 Orthogroups_2024-Update
Sobic.010G011200.1 No alias chaperone *(Hsp60) & subunit beta of CPN60 assembly... 0.05 Orthogroups_2024-Update
Solyc01g028810 No alias Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU) 0.05 Orthogroups_2024-Update
Solyc02g068730 No alias Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI) 0.05 Orthogroups_2024-Update
Solyc03g120850 No alias Chaperonin-60 beta subunit (AHRD V3.3 *** P93570_SOLTU) 0.08 Orthogroups_2024-Update
Solyc09g091180 No alias Chaperonin CPN60, mitochondrial (AHRD V3.3 *** CH60A_ARATH) 0.03 Orthogroups_2024-Update
Solyc11g069790 No alias Chaperonin 60 alpha subunit (AHRD V3.3 *** Q9ZTV1_CANLI) 0.06 Orthogroups_2024-Update
evm.model.contig_4417.1 No alias (at2g28000 : 575.0) Encodes chaperonin-60 alpha, a... 0.02 Orthogroups_2024-Update
evm.model.contig_552.1 No alias (q05046|ch62_cucma : 684.0) Chaperonin CPN60-2,... 0.02 Orthogroups_2024-Update
evm.model.tig00001269.7 No alias (q05046|ch62_cucma : 728.0) Chaperonin CPN60-2,... 0.01 Orthogroups_2024-Update
evm.model.tig00020943.69 No alias (p08823|ruba_wheat : 426.0) RuBisCO large... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 83 585
No external refs found!