Sopen03g039740


Description : MEKHLA domain


Gene families : OG_42_0000541 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000541_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g039740
Cluster HCCA clusters: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
Brara.D02105.1 No alias HD-ZIP III-type transcription factor 0.03 Orthogroups_2024-Update
Brara.E00955.1 No alias HD-ZIP III-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I02808.1 No alias HD-ZIP III-type transcription factor 0.03 Orthogroups_2024-Update
Brara.J01422.1 No alias HD-ZIP III-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.04G085000 No alias homeobox gene 8 0.03 Orthogroups_2024-Update
Glyma.06G086600 No alias homeobox gene 8 0.03 Orthogroups_2024-Update
MA_10427484g0010 No alias (at1g52150 : 1097.0) Member of the class III HD-ZIP... 0.03 Orthogroups_2024-Update
MA_10429434g0010 No alias (at2g34710 : 458.0) Dominant PHB mutations cause... 0.03 Orthogroups_2024-Update
MA_112057g0010 No alias (at1g52150 : 1161.0) Member of the class III HD-ZIP... 0.03 Orthogroups_2024-Update
PSME_00005242-RA No alias (at1g52150 : 812.0) Member of the class III HD-ZIP... 0.02 Orthogroups_2024-Update
PSME_00019067-RA No alias (at1g52150 : 1149.0) Member of the class III HD-ZIP... 0.02 Orthogroups_2024-Update
PSME_00022002-RA No alias (at1g52150 : 417.0) Member of the class III HD-ZIP... 0.03 Orthogroups_2024-Update
Seita.5G141300.1 No alias HD-ZIP III-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0008289 lipid binding IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 160 368
IPR001356 Homeobox_dom 16 74
IPR013978 MEKHLA 692 835
No external refs found!