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  5. Sopen03g040050

Sopen03g040050


Description : Helix-loop-helix DNA-binding domain


Gene families : OG_42_0000531 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000531_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g040050
Cluster HCCA clusters: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
405220 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
A4A49_11267 No alias transcription factor bhlh87 0.02 Orthogroups_2024-Update
Brara.A02143.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G397518 No alias APRATAXIN-like 0.02 Orthogroups_2024-Update
HORVU0Hr1G019640.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
HORVU3Hr1G066600.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Sobic.007G155300.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Sopen06g021950 No alias Helix-loop-helix DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 289 328
No external refs found!