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  5. Sopen03g040210

Sopen03g040210


Description : Dof domain, zinc finger


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g040210
Cluster HCCA clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
29563 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
29617 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
89924 No alias cycling DOF factor 1 0.02 Orthogroups_2024-Update
A4A49_13356 No alias cyclic dof factor 3 0.03 Orthogroups_2024-Update
At1g21340 No alias Dof zinc finger protein DOF1.2... 0.03 Orthogroups_2024-Update
Bradi2g10640 No alias cycling DOF factor 3 0.01 Orthogroups_2024-Update
Bradi3g25670 No alias cycling DOF factor 1 0.03 Orthogroups_2024-Update
Brara.H02152.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.I00088.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
GRMZM2G146283 No alias TARGET OF MONOPTEROS 6 0.02 Orthogroups_2024-Update
Glyma.04G168300 No alias cycling DOF factor 3 0.02 Orthogroups_2024-Update
Glyma.09G237000 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
Glyma.12G063800 No alias OBF-binding protein 3 0.04 Orthogroups_2024-Update
Glyma.13G241900 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.15G076000 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.17G081800 No alias OBF binding protein 4 0.04 Orthogroups_2024-Update
LOC_Os01g48290 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g15350 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g48570 No alias expressed protein 0.02 Orthogroups_2024-Update
MA_175298g0010 No alias (at5g39660 : 214.0) Dof-type zinc finger... 0.04 Orthogroups_2024-Update
PSME_00056573-RA No alias (at5g62940 : 127.0) HCA2 induces the formation of... 0.03 Orthogroups_2024-Update
Potri.001G238400 No alias OBF-binding protein 3 0.02 Orthogroups_2024-Update
Potri.008G055100 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Pp1s351_46V6 No alias zinc finger 0.03 Orthogroups_2024-Update
Seita.9G452000.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.009G014400.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Solyc02g088070 No alias Dof zinc finger protein (AHRD V3.3 *** W9QEV1_9ROSA) 0.02 Orthogroups_2024-Update
Solyc04g070960 No alias Dof zinc finger protein (AHRD V3.3 *-* W9S6D3_9ROSA) 0.03 Orthogroups_2024-Update
Solyc06g069760 No alias Dof zinc finger protein 22 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 18 74
No external refs found!