Sopen03g040510

Description : Nucleosome assembly protein (NAP)

Gene families : OG_42_0000956 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000956_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen03g040510
Cluster	HCCA clusters: Cluster_149

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g50860	No alias	nucleosome assembly protein 1;2	0.02	Orthogroups_2024-Update
Cre09.g416350	No alias	nucleosome assembly protein1;1	0.02	Orthogroups_2024-Update
Kfl00303_0140	kfl00303_0140_v1.1	(at5g56950 : 285.0) Encodes a member of a small gene...	0.02	Orthogroups_2024-Update
Solyc12g008940	No alias	Nucleosome assembly protein 1-1 (AHRD V3.3 *** NAP1A_TOBAC)	0.03	Orthogroups_2024-Update
evm.model.tig00001310.8	No alias	(at5g56950 : 162.0) Encodes a member of a small gene...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006334	nucleosome assembly	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0034622	cellular protein-containing complex assembly	None	Extended
BP	GO:0034728	nucleosome organization	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex subunit organization	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065004	protein-DNA complex assembly	None	Extended
BP	GO:0071824	protein-DNA complex subunit organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002164	NAP_family	62	309

External Links

No external refs found!