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  5. Sopen03g041210

Sopen03g041210


Description : AP2 domain


Gene families : OG_42_0000060 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g041210
Cluster HCCA clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
At5g60120 No alias Target of early activation tagged (EAT) 2... 0.02 Orthogroups_2024-Update
Bradi2g48130 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Brara.A00160.1 No alias AP2-type transcription factor *(WRI/AIL) 0.02 Orthogroups_2024-Update
Brara.F01116.1 No alias AP2-type transcription factor *(WRI/AIL) 0.03 Orthogroups_2024-Update
Brara.G01191.1 No alias AP2-type transcription factor *(WRI/AIL) 0.03 Orthogroups_2024-Update
Brara.J01807.1 No alias AP2-type transcription factor *(WRI/AIL) 0.02 Orthogroups_2024-Update
GRMZM2G174834 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.01G022500 No alias AINTEGUMENTA-like 6 0.01 Orthogroups_2024-Update
Glyma.08G227700 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G148000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G256000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G138000 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Kfl00280_0010 kfl00280_0010_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00027655-RA No alias (at1g51190 : 368.0) Encodes a member of the... 0.01 Orthogroups_2024-Update
PSME_00036178-RA No alias (at4g18520 : 129.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
Potri.007G011600 No alias AINTEGUMENTA-like 6 0.02 Orthogroups_2024-Update
Pp1s131_139V6 No alias ap2 domain-containing transcription factor 0.02 Orthogroups_2024-Update
Seita.5G356300.1 No alias AP2-type transcription factor *(WRI/AIL) 0.02 Orthogroups_2024-Update
Seita.8G031900.1 No alias AP2-type transcription factor *(WRI/AIL) 0.02 Orthogroups_2024-Update
Solyc06g075510 No alias APETALA2e 0.02 Orthogroups_2024-Update
Solyc09g007260 No alias AP2-like ethylene-responsive transcription factor (AHRD... 0.03 Orthogroups_2024-Update
Sopen05g029780 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen06g031890 No alias AP2 domain 0.03 Orthogroups_2024-Update
evm.model.tig00000194.23 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 241 300
IPR001471 AP2/ERF_dom 345 394
No external refs found!