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  5. Sopen03g041300

Sopen03g041300


Description : CBF/Mak21 family


Gene families : OG_42_0005575 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005575_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g041300
Cluster HCCA clusters: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
405981 No alias CCAAT-binding factor 0.03 Orthogroups_2024-Update
At1g72440 No alias CCAAT-binding factor [Source:UniProtKB/TrEMBL;Acc:F4IDC2] 0.1 Orthogroups_2024-Update
Bradi3g47770 No alias CCAAT-binding factor 0.12 Orthogroups_2024-Update
Brara.G03129.1 No alias component *(NOC1) of ribosomal-subunit proteome nuclear... 0.07 Orthogroups_2024-Update
Cre10.g459600 No alias CCAAT-binding factor 0.04 Orthogroups_2024-Update
Glyma.07G043700 No alias CCAAT-binding factor 0.07 Orthogroups_2024-Update
Glyma.16G012100 No alias CCAAT-binding factor 0.12 Orthogroups_2024-Update
HORVU6Hr1G053890.9 No alias component *(NOC1) of ribosomal-subunit proteome nuclear... 0.02 Orthogroups_2024-Update
Kfl00105_0290 kfl00105_0290_v1.1 (at1g72440 : 437.0) Encodes SLOW WALKER2 (SWA2), a... 0.07 Orthogroups_2024-Update
LOC_Os09g02810 No alias CCAAT/enhancer-binding protein, putative, expressed 0.04 Orthogroups_2024-Update
Pp1s8_147V6 No alias ccaat enhancer binding protein zeta 0.04 Orthogroups_2024-Update
Seita.2G178000.1 No alias component *(NOC1) of ribosomal-subunit proteome nuclear... 0.06 Orthogroups_2024-Update
Sobic.001G453400.2 No alias component *(NOC1) of ribosomal-subunit proteome nuclear... 0.05 Orthogroups_2024-Update
Solyc03g123530 No alias CCAAT/enhancer-binding zeta (AHRD V3.3 *** A0A0B0MUY0_GOSAR) 0.23 Orthogroups_2024-Update
evm.model.tig00021293.22 No alias no hits & (original description: no original description) 0.09 Orthogroups_2024-Update
evm.model.tig00021293.23 No alias (at1g72440 : 137.0) Encodes SLOW WALKER2 (SWA2), a... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005612 CCAAT-binding_factor 510 762
No external refs found!