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  5. Solyc02g037640

Solyc02g037640


Description : LOW QUALITY:DNA helicase homolog, putative (AHRD V3.3 *-* Q1EPC6_MUSAC)


Gene families : OG_42_0000057 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g037640
Cluster HCCA clusters: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
Glyma.10G108221 No alias Function unknown 0.02 Orthogroups_2024-Update
Glyma.16G109000 No alias PIF1 helicase 0.02 Orthogroups_2024-Update
Glyma.20G059700 No alias Function unknown 0.03 Orthogroups_2024-Update
LOC_Os04g28820 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Potri.001G266800 No alias PIF1 helicase 0.04 Orthogroups_2024-Update
Seita.6G126900.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEA InterProScan predictions
MF GO:0003678 DNA helicase activity IEA InterProScan predictions
BP GO:0006281 DNA repair IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
InterPro domains Description Start Stop
IPR010285 DNA_helicase_pif1-like 78 267
No external refs found!