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  5. Sopen03g041400

Sopen03g041400


Description : Pectinesterase


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g041400
Cluster HCCA clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
A4A49_16804 No alias putative pectinesterasepectinesterase inhibitor 12 0.03 Orthogroups_2024-Update
A4A49_40779 No alias putative pectinesterasepectinesterase inhibitor 34 0.02 Orthogroups_2024-Update
At5g53370 No alias pectin methylesterase PCR fragment F [Source:TAIR;Acc:AT5G53370] 0.02 Orthogroups_2024-Update
Bradi2g11860 No alias pectin methylesterase 3 0.02 Orthogroups_2024-Update
Brara.A03198.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
HORVU7Hr1G032330.3 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.02 Orthogroups_2024-Update
LOC_Os11g07090 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
MA_51464g0010 No alias (at4g02330 : 470.0) ATPMEPCRB; FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
MA_9367g0020 No alias (o04886|pme1_citsi : 511.0) Pectinesterase-1 precursor... 0.02 Orthogroups_2024-Update
Mp8g00060.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
PSME_00035570-RA No alias (at1g53830 : 567.0) encodes a pectin methylesterase;... 0.02 Orthogroups_2024-Update
Potri.011G135000 No alias methylesterase PCR A 0.02 Orthogroups_2024-Update
Sobic.006G105500.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Solyc03g123630 No alias pectin methylesterase 0.11 Orthogroups_2024-Update
Solyc06g009190 No alias Pectinesterase (AHRD V3.3 *** K4C3U9_SOLLC) 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan predictions
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 272 568
IPR006501 Pectinesterase_inhib_dom 65 221
No external refs found!