Sopen03g041720

Description : Pumilio-family RNA binding repeat

Gene families : OG_42_0003031 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003031_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen03g041720
Cluster	HCCA clusters: Cluster_253

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001313	Pumilio_RNA-bd_rpt	844	876
IPR001313	Pumilio_RNA-bd_rpt	698	730
IPR001313	Pumilio_RNA-bd_rpt	664	692
IPR001313	Pumilio_RNA-bd_rpt	737	766
IPR001313	Pumilio_RNA-bd_rpt	771	804
IPR001313	Pumilio_RNA-bd_rpt	926	947
IPR001313	Pumilio_RNA-bd_rpt	814	834
IPR001313	Pumilio_RNA-bd_rpt	880	913

External Links

No external refs found!