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  5. Sopen04g001150

Sopen04g001150


Description : Helix-loop-helix DNA-binding domain


Gene families : OG_42_0000125 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g001150
Cluster HCCA clusters: Cluster_374

Target Alias Description ECC score Gene Family Method Actions
At1g26260 No alias Transcription factor bHLH76... 0.03 Orthogroups_2024-Update
Brara.H01674.1 No alias regulatory protein (CIB) of blue light perception &... 0.03 Orthogroups_2024-Update
LOC_Os03g58830 No alias BEE 1, putative, expressed 0.03 Orthogroups_2024-Update
Potri.014G148900 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Solyc03g097820 No alias bHLH transcription factor 022 0.05 Orthogroups_2024-Update
Solyc03g113560 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily... 0.04 Orthogroups_2024-Update
Sopen01g005670 No alias Helix-loop-helix DNA-binding domain 0.04 Orthogroups_2024-Update
Sopen06g028890 No alias Helix-loop-helix DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 110 157
No external refs found!