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  5. Sopen04g001200

Sopen04g001200


Description : Helix-loop-helix DNA-binding domain


Gene families : OG_42_0000125 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g001200
Cluster HCCA clusters: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Bradi1g43650 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
PSME_00043508-RA No alias (at1g68920 : 195.0) basic helix-loop-helix (bHLH)... 0.04 Orthogroups_2024-Update
Solyc01g010130 No alias bHLH transcription factor 001 0.02 Orthogroups_2024-Update
Sopen06g028890 No alias Helix-loop-helix DNA-binding domain 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 301 349
No external refs found!