Sopen04g001670

Description : mTERF

Gene families : OG_42_0003061 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003061_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen04g001670
Cluster	HCCA clusters: Cluster_149

Target	Alias	Description	ECC score	Gene Family Method
At4g02990	No alias	Transcription termination factor MTERF4, chloroplastic...	0.03	Orthogroups_2024-Update
Brara.I00194.1	No alias	mTERF4 plastidial RNA splicing factor & mTERF-type...	0.07	Orthogroups_2024-Update
Glyma.02G223000	No alias	Mitochondrial transcription termination factor family protein	0.06	Orthogroups_2024-Update
Mp1g22560.1	No alias	transcription factor (mTERF)	0.02	Orthogroups_2024-Update
Seita.3G248600.1	No alias	mTERF4 plastidial RNA splicing factor & mTERF-type...	0.03	Orthogroups_2024-Update
Solyc04g005630	No alias	Mitochondrial transcription termination factor family...	0.06	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003690	double-stranded DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003690	MTERF	165	472

External Links

No external refs found!

Sopen04g001670

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation