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  5. Sopen04g001950

Sopen04g001950


Description : FBD


Gene families : OG_42_0000312 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000312_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g001950
Cluster HCCA clusters: Cluster_281

Target Alias Description ECC score Gene Family Method Actions
A4A49_15599 No alias f-boxfbd/lrr-repeat protein 0.03 Orthogroups_2024-Update
A4A49_40025 No alias f-boxfbd/lrr-repeat protein 0.02 Orthogroups_2024-Update
Brara.F00902.1 No alias substrate adaptor of SCF E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update
LOC_Os08g35960 No alias OsFBD14 - F-box and FBD domain containing protein, expressed 0.01 Orthogroups_2024-Update
Potri.017G107600 No alias F-box/RNI-like superfamily protein 0.01 Orthogroups_2024-Update
Solyc04g079800 No alias F-box family protein (AHRD V3.3 *** B9HWR1_POPTR) 0.02 Orthogroups_2024-Update
Solyc11g011520 No alias No description available 0.03 Orthogroups_2024-Update
Sopen05g006140 No alias FBD 0.02 Orthogroups_2024-Update
Sopen11g006340 No alias F-box domain 0.02 Orthogroups_2024-Update
Sopen11g006400 No alias F-box domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006566 FBD 346 385
IPR001810 F-box_dom 9 42
No external refs found!