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  5. Sopen04g002270

Sopen04g002270


Description : CCT motif


Gene families : OG_42_0000843 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000843_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g002270
Cluster HCCA clusters: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
Bradi3g57000 No alias B-box type zinc finger protein with CCT domain 0.02 Orthogroups_2024-Update
Brara.C00622.1 No alias CMF transcription factor 0.02 Orthogroups_2024-Update
Brara.H02107.1 No alias BBX class-III transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G114137 No alias B-box type zinc finger protein with CCT domain 0.02 Orthogroups_2024-Update
GRMZM2G144346 No alias B-box type zinc finger protein with CCT domain 0.05 Orthogroups_2024-Update
Glyma.16G067000 No alias CCT motif family protein 0.03 Orthogroups_2024-Update
Glyma.19G079600 No alias CCT motif family protein 0.02 Orthogroups_2024-Update
Mp3g19670.1 No alias transcription factor (BBX-CO) 0.03 Orthogroups_2024-Update
PSME_00017908-RA No alias (at1g25440 : 173.0) B-box type zinc finger protein with... 0.02 Orthogroups_2024-Update
Pp1s12_404V6 No alias No description available 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000315 Znf_B-box 6 49
IPR010402 CCT_domain 364 406
No external refs found!