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  5. Sopen04g002340

Sopen04g002340


Description : Nucleoporin autopeptidase


Gene families : OG_42_0001108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g002340
Cluster HCCA clusters: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
Bradi2g08980 No alias Nucleoporin autopeptidase 0.03 Orthogroups_2024-Update
Brara.I01610.1 No alias nucleoporin of nuclear pore complex *(NUP98) 0.02 Orthogroups_2024-Update
Cre02.g086887 No alias SUPPRESSOR OF AUXIN RESISTANCE 3 0.03 Orthogroups_2024-Update
HORVU4Hr1G024430.8 No alias nucleoporin of nuclear pore complex *(NUP98) 0.03 Orthogroups_2024-Update
Seita.8G000600.1 No alias nucleoporin of nuclear pore complex *(NUP98) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005643 nuclear pore IEA InterProScan predictions
BP GO:0006913 nucleocytoplasmic transport IEA InterProScan predictions
MF GO:0017056 structural constituent of nuclear pore IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007230 Peptidase_S59 834 979
No external refs found!