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  5. Sopen04g002530

Sopen04g002530


Description : PB1 domain


Gene families : OG_42_0000314 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000314_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g002530
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
A4A49_05646 No alias hypothetical protein 0.04 Orthogroups_2024-Update
A4A49_06372 No alias hypothetical protein 0.03 Orthogroups_2024-Update
A4A49_20052 No alias hypothetical protein 0.03 Orthogroups_2024-Update
A4A49_25637 No alias hypothetical protein 0.04 Orthogroups_2024-Update
Brara.F01686.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F02321.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G050085 No alias Octicosapeptide/Phox/Bem1p family protein 0.02 Orthogroups_2024-Update
Glyma.06G178000 No alias Octicosapeptide/Phox/Bem1p family protein 0.03 Orthogroups_2024-Update
Glyma.08G065000 No alias Octicosapeptide/Phox/Bem1p family protein 0.04 Orthogroups_2024-Update
Glyma.12G166300 No alias Octicosapeptide/Phox/Bem1p family protein 0.04 Orthogroups_2024-Update
Glyma.15G060600 No alias Octicosapeptide/Phox/Bem1p family protein 0.03 Orthogroups_2024-Update
MA_10426590g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_72603g0020 No alias (at5g09620 : 156.0) Octicosapeptide/Phox/Bem1p family... 0.02 Orthogroups_2024-Update
MA_94930g0010 No alias (at3g26510 : 122.0) Octicosapeptide/Phox/Bem1p family... 0.03 Orthogroups_2024-Update
Potri.008G186500 No alias Octicosapeptide/Phox/Bem1p family protein 0.03 Orthogroups_2024-Update
Potri.015G083400 No alias Octicosapeptide/Phox/Bem1p family protein 0.04 Orthogroups_2024-Update
Seita.3G234100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G096000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.005G111200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Solyc04g076820 No alias Octicosapeptide/Phox/Bem1p domain-containing protein... 0.04 Orthogroups_2024-Update
Sopen01g045810 No alias PB1 domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000270 PB1_dom 89 173
No external refs found!