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  5. Sopen04g004340

Sopen04g004340


Description : PPR repeat


Gene families : OG_42_0009579 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009579_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g004340
Cluster HCCA clusters: Cluster_357

Target Alias Description ECC score Gene Family Method Actions
Glyma.20G104500 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 387 411
IPR002885 Pentatricopeptide_repeat 153 179
IPR002885 Pentatricopeptide_repeat 285 307
IPR002885 Pentatricopeptide_repeat 210 257
IPR002885 Pentatricopeptide_repeat 313 360
IPR002885 Pentatricopeptide_repeat 77 123
No external refs found!