Sopen04g004370

Description : NB-ARC domain

Gene families : OG_42_0000068 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen04g004370
Cluster	HCCA clusters: Cluster_172

Target	Alias	Description	ECC score	Gene Family Method
A4A49_06155	No alias	putative disease resistance protein	0.02	Orthogroups_2024-Update
A4A49_23486	No alias	putative disease resistance rpp13-like protein 3	0.03	Orthogroups_2024-Update
At1g59780	No alias	Putative disease resistance protein At1g59780...	0.02	Orthogroups_2024-Update
At3g46730	No alias	Putative disease resistance RPP13-like protein 3...	0.03	Orthogroups_2024-Update
Brara.I01586.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os04g46300	No alias	disease resistance protein RPM1, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os06g22460	No alias	disease resistance protein RPM1, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os12g14330	No alias	disease resistance protein RPM1, putative, expressed	0.02	Orthogroups_2024-Update
Potri.001G134400	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Potri.011G031400	No alias	NB-ARC domain-containing disease resistance protein	0.02	Orthogroups_2024-Update
Seita.2G246300.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.005G095680.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc04g009150	No alias	Nbs-lrr resistance protein (AHRD V3.3 *** A0A061FZT5_THECC)	0.04	Orthogroups_2024-Update
Solyc04g009690	No alias	LOW QUALITY:Nbs-lrr resistance protein (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	1	69

External Links

No external refs found!