Sopen04g004540

Description : Proteasome subunit

Gene families : OG_42_0002994 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002994_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen04g004540
Cluster	HCCA clusters: Cluster_138

Target	Alias	Description	ECC score	Gene Family Method
Cre06.g267500	No alias	20S proteasome beta subunit C2	0.02	Orthogroups_2024-Update
HORVU0Hr1G015750.1	No alias	beta-type-3 component *(PBC) of 26S proteasome	0.02	Orthogroups_2024-Update
LOC_Os02g08520	No alias	peptidase, T1 family, putative, expressed	0.02	Orthogroups_2024-Update
Mp7g15370.1	No alias	component beta type-3 of 26S proteasome	0.05	Orthogroups_2024-Update
Potri.002G080800	No alias	proteasome beta subunit C1	0.02	Orthogroups_2024-Update
Seita.1G060900.1	No alias	beta-type-3 component *(PBC) of 26S proteasome	0.03	Orthogroups_2024-Update
Seita.4G202500.1	No alias	beta-type-3 component *(PBC) of 26S proteasome	0.04	Orthogroups_2024-Update
Sobic.010G204500.1	No alias	beta-type-3 component *(PBC) of 26S proteasome	0.02	Orthogroups_2024-Update
Solyc04g009410	No alias	Proteasome subunit beta type (AHRD V3.3 *** K4BP97_SOLLC)	0.02	Orthogroups_2024-Update
evm.model.contig_575.4	No alias	(q9lst7\|psb3_orysa : 259.0) Proteasome subunit beta type...	0.03	Orthogroups_2024-Update
evm.model.tig00000826.22	No alias	(q9lst7\|psb3_orysa : 263.0) Proteasome subunit beta type...	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004175	endopeptidase activity	None	Extended
MF	GO:0004298	threonine-type endopeptidase activity	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	InterProScan predictions
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEA	InterProScan predictions
MF	GO:0070003	threonine-type peptidase activity	None	Extended
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	7	189

External Links

No external refs found!