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  5. Sopen04g005090

Sopen04g005090


Description : Beta-eliminating lyase


Gene families : OG_42_0002557 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002557_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g005090
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G004824 No alias threonine aldolase 1 0.02 Orthogroups_2024-Update
GRMZM2G147268 No alias threonine aldolase 1 0.03 Orthogroups_2024-Update
GRMZM5G871471 No alias threonine aldolase 2 0.03 Orthogroups_2024-Update
HORVU4Hr1G085690.4 No alias threonine aldolase & EC_4.1 carbon-carbon lyase 0.02 Orthogroups_2024-Update
PSME_00011848-RA No alias (at3g04520 : 195.0) Encodes a threonine aldolase,... 0.02 Orthogroups_2024-Update
Sobic.006G147600.1 No alias threonine aldolase & EC_4.1 carbon-carbon lyase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006520 cellular amino acid metabolic process IEA InterProScan predictions
MF GO:0016829 lyase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001597 ArAA_b-elim_lyase/Thr_aldolase 7 294
No external refs found!