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  5. Sopen04g005580

Sopen04g005580


Description : Core histone H2A/H2B/H3/H4


Gene families : OG_42_0000156 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g005580
Cluster HCCA clusters: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
167497 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
A4A49_57227 No alias histone h4 0.02 Orthogroups_2024-Update
A4A49_58366 No alias histone h4 0.04 Orthogroups_2024-Update
A4A49_59902 No alias histone h4 0.04 Orthogroups_2024-Update
A4A49_60016 No alias histone h4 0.04 Orthogroups_2024-Update
A4A49_61887 No alias histone h4 0.02 Orthogroups_2024-Update
A4A49_64267 No alias histone h4 0.02 Orthogroups_2024-Update
AC196961.2_FG003 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
AC212565.3_FG001 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
AC233865.1_FG001 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
At1g07820 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.05 Orthogroups_2024-Update
At2g28740 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.06 Orthogroups_2024-Update
At3g53730 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.04 Orthogroups_2024-Update
At5g59690 No alias Histone H4 [Source:UniProtKB/TrEMBL;Acc:A0A178VF54] 0.04 Orthogroups_2024-Update
Bradi2g22787 No alias Function unknown 0.03 Orthogroups_2024-Update
Bradi2g23004 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Brara.C01220.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Brara.C01885.1 No alias histone *(H4) 0.05 Orthogroups_2024-Update
Brara.D02284.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Brara.F00466.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Brara.G01399.1 No alias histone *(H4) 0.06 Orthogroups_2024-Update
Brara.H02899.1 No alias histone *(H4) 0.05 Orthogroups_2024-Update
Brara.I03658.1 No alias histone *(H4) 0.06 Orthogroups_2024-Update
Cre06.g264600 No alias histone H4 0.03 Orthogroups_2024-Update
Cre06.g265050 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre06.g265200 No alias histone H4 0.06 Orthogroups_2024-Update
Cre06.g265450 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g268000 No alias histone H4 0.03 Orthogroups_2024-Update
Cre06.g268400 No alias Histone superfamily protein 0.08 Orthogroups_2024-Update
Cre06.g271300 No alias histone H4 0.05 Orthogroups_2024-Update
Cre06.g274150 No alias histone H4 0.02 Orthogroups_2024-Update
Cre06.g274300 No alias histone H4 0.06 Orthogroups_2024-Update
Cre06.g274900 No alias histone H4 0.06 Orthogroups_2024-Update
Cre06.g275700 No alias histone H4 0.09 Orthogroups_2024-Update
Cre06.g276650 No alias histone H4 0.05 Orthogroups_2024-Update
Cre12.g504600 No alias histone H4 0.03 Orthogroups_2024-Update
Cre12.g504850 No alias histone H4 0.06 Orthogroups_2024-Update
Cre12.g505450 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre12.g506350 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre12.g506450 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre17.g708650 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Cre17.g709100 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
GRMZM2G084195 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G143780 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G149178 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
GRMZM2G421279 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G224100 No alias Histone superfamily protein 0.1 Orthogroups_2024-Update
Glyma.03G171400 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G146481 No alias Histone superfamily protein 0.1 Orthogroups_2024-Update
Glyma.11G177800 No alias Histone superfamily protein 0.07 Orthogroups_2024-Update
Glyma.11G177900 No alias Histone superfamily protein 0.08 Orthogroups_2024-Update
Glyma.11G178100 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.11G178200 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
Glyma.12G074500 No alias Histone superfamily protein 0.07 Orthogroups_2024-Update
Glyma.13G147000 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
Glyma.14G190800 No alias Histone superfamily protein 0.07 Orthogroups_2024-Update
Glyma.15G043200 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
Glyma.17G063200 No alias histone H4 0.07 Orthogroups_2024-Update
Glyma.18G064300 No alias Histone superfamily protein 0.07 Orthogroups_2024-Update
Glyma.18G064401 No alias Histone superfamily protein 0.08 Orthogroups_2024-Update
Glyma.20G083800 No alias histone H4 0.07 Orthogroups_2024-Update
HORVU1Hr1G020040.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU1Hr1G020060.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU1Hr1G073680.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU2Hr1G093680.3 No alias histone *(H4) 0.02 Orthogroups_2024-Update
HORVU2Hr1G098340.4 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU3Hr1G088160.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
HORVU4Hr1G063260.2 No alias histone *(H4) 0.04 Orthogroups_2024-Update
HORVU5Hr1G087830.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
HORVU6Hr1G011510.1 No alias histone *(H4) 0.04 Orthogroups_2024-Update
Kfl00106_g14 kfl00106_g14_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Kfl00240_g19 kfl00240_g19_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Kfl00394_0030 kfl00394_0030_v1.1 (at5g59970 : 160.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update
MA_10428555g0010 No alias (at5g59970 : 161.0) Histone superfamily protein;... 0.04 Orthogroups_2024-Update
MA_97951g0010 No alias (at5g59970 : 160.0) Histone superfamily protein;... 0.04 Orthogroups_2024-Update
Mp4g03080.1 No alias histone (H4) 0.02 Orthogroups_2024-Update
Mp4g03090.1 No alias histone (H4) 0.02 Orthogroups_2024-Update
Mp4g13440.1 No alias histone (H4) 0.02 Orthogroups_2024-Update
Mp5g22460.1 No alias histone (H4) 0.03 Orthogroups_2024-Update
Mp5g22470.1 No alias histone (H4) 0.03 Orthogroups_2024-Update
PSME_00034343-RA No alias (at5g59970 : 162.0) Histone superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.007G012500 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Pp1s378_30V6 No alias histone h4 0.02 Orthogroups_2024-Update
Seita.2G301400.1 No alias histone *(H4) 0.03 Orthogroups_2024-Update
Seita.6G125400.1 No alias histone *(H4) 0.05 Orthogroups_2024-Update
Seita.7G212600.1 No alias histone *(H4) 0.06 Orthogroups_2024-Update
Solyc04g011390 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.09 Orthogroups_2024-Update
Solyc05g054610 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.06 Orthogroups_2024-Update
Solyc06g005420 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.04 Orthogroups_2024-Update
Solyc06g005430 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.08 Orthogroups_2024-Update
Solyc06g075830 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.07 Orthogroups_2024-Update
Solyc06g075850 No alias No description available 0.08 Orthogroups_2024-Update
Solyc06g075930 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.09 Orthogroups_2024-Update
Solyc06g075960 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.09 Orthogroups_2024-Update
Solyc11g066160 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.09 Orthogroups_2024-Update
Solyc11g072840 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.07 Orthogroups_2024-Update
Solyc11g072860 No alias histone H4 (AHRD V3.3 *** AT2G28740.1) 0.06 Orthogroups_2024-Update
Sopen06g028560 No alias Core histone H2A/H2B/H3/H4 0.03 Orthogroups_2024-Update
evm.model.contig_2255.1 No alias (at5g59970 : 154.0) Histone superfamily protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!