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  5. Sopen04g005680

Sopen04g005680


Description : Actin


Gene families : OG_42_0000262 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g005680
Cluster HCCA clusters: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
Brara.B01101.1 No alias actin filament protein 0.04 Orthogroups_2024-Update
Glyma.03G144800 No alias actin-11 0.03 Orthogroups_2024-Update
Glyma.04G215900 No alias actin 7 0.08 Orthogroups_2024-Update
Glyma.09G111200 No alias actin 1 0.04 Orthogroups_2024-Update
Glyma.11G139800 No alias actin-11 0.04 Orthogroups_2024-Update
Glyma.12G063400 No alias actin-11 0.04 Orthogroups_2024-Update
Glyma.15G038700 No alias actin-11 0.03 Orthogroups_2024-Update
Glyma.19G000900 No alias actin-11 0.04 Orthogroups_2024-Update
Glyma.19G147900 No alias actin 7 0.03 Orthogroups_2024-Update
HORVU5Hr1G039850.3 No alias actin filament protein 0.04 Orthogroups_2024-Update
LOC_Os12g44350 No alias actin, putative, expressed 0.02 Orthogroups_2024-Update
MA_96086g0010 No alias (at5g09810 : 707.0) Member of Actin gene family.Mutants... 0.02 Orthogroups_2024-Update
PSME_00045427-RA No alias (o81221|act_goshi : 556.0) Actin - Gossypium hirsutum... 0.02 Orthogroups_2024-Update
Potri.001G309500 No alias actin 7 0.05 Orthogroups_2024-Update
Seita.8G043100.1 No alias actin filament protein 0.04 Orthogroups_2024-Update
Sobic.001G022800.1 No alias actin filament protein 0.03 Orthogroups_2024-Update
Sobic.005G047100.1 No alias actin filament protein 0.02 Orthogroups_2024-Update
Sobic.008G047000.1 No alias actin filament protein 0.04 Orthogroups_2024-Update
Solyc03g078400 No alias actin 0.04 Orthogroups_2024-Update
Solyc04g011500 No alias actin 0.15 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!