Sopen04g006170

Description : AP2 domain

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen04g006170
Cluster	HCCA clusters: Cluster_167

Target	Alias	Description	ECC score	Gene Family Method
A4A49_02884	No alias	ethylene-responsive transcription factor 14	0.04	Orthogroups_2024-Update
A4A49_06467	No alias	ethylene-responsive transcription factor crf4	0.03	Orthogroups_2024-Update
A4A49_33000	No alias	ethylene-responsive transcription factor 14	0.03	Orthogroups_2024-Update
A4A49_36078	No alias	ethylene-responsive transcription factor 5	0.03	Orthogroups_2024-Update
A4A49_36835	No alias	ethylene-responsive transcription factor 5	0.05	Orthogroups_2024-Update
At1g19210	No alias	Ethylene-responsive transcription factor ERF017...	0.03	Orthogroups_2024-Update
At1g25470	No alias	Ethylene-responsive transcription factor ERF116...	0.03	Orthogroups_2024-Update
At1g77200	No alias	Ethylene-responsive transcription factor ERF037...	0.04	Orthogroups_2024-Update
At2g38340	No alias	Dehydration-responsive element-binding protein 2E...	0.02	Orthogroups_2024-Update
At4g25480	No alias	Dehydration-responsive element-binding protein 1A...	0.03	Orthogroups_2024-Update
At5g13910	No alias	LEP [Source:UniProtKB/TrEMBL;Acc:A0A178UQP2]	0.03	Orthogroups_2024-Update
At5g61890	No alias	Ethylene-responsive transcription factor ERF114...	0.03	Orthogroups_2024-Update
Bradi1g72449	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi3g41543	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi3g56801	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Brara.A00881.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.D01390.1	No alias	subgroup ERF-II-DEAR transcription factor	0.02	Orthogroups_2024-Update
Brara.E00471.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Brara.F01050.1	No alias	cutin and suberin biosynthesis transcription factor...	0.02	Orthogroups_2024-Update
Brara.H00430.1	No alias	subgroup ERF-II-DEAR transcription factor	0.03	Orthogroups_2024-Update
Brara.H01375.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Brara.H01496.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Brara.H02229.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Brara.I02949.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Brara.I04678.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Brara.J00058.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G053503	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G174917	No alias	DREB and EAR motif protein 3	0.03	Orthogroups_2024-Update
GRMZM2G421033	No alias	DREB and EAR motif protein 3	0.02	Orthogroups_2024-Update
Glyma.02G261700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.03G111700	No alias	ethylene-responsive element binding factor 13	0.02	Orthogroups_2024-Update
Glyma.03G112000	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Glyma.03G159800	No alias	ethylene responsive element binding factor 3	0.02	Orthogroups_2024-Update
Glyma.03G162700	No alias	ethylene-responsive element binding factor 15	0.03	Orthogroups_2024-Update
Glyma.04G062900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.05G228100	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.07G044300	No alias	related to AP2 12	0.03	Orthogroups_2024-Update
Glyma.07G212400	No alias	redox responsive transcription factor 1	0.02	Orthogroups_2024-Update
Glyma.08G137600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.08G281900	No alias	DORNROSCHEN-like	0.04	Orthogroups_2024-Update
Glyma.10G193400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.10G274600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.11G036400	No alias	ethylene responsive element binding factor 5	0.03	Orthogroups_2024-Update
Glyma.11G036500	No alias	ethylene responsive element binding factor 1	0.03	Orthogroups_2024-Update
Glyma.13G152000	No alias	C-repeat-binding factor 4	0.02	Orthogroups_2024-Update
Glyma.14G111600	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.15G077000	No alias	ERF domain protein 12	0.03	Orthogroups_2024-Update
Glyma.15G095600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.17G124100	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Glyma.17G219700	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.18G018200	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.18G144700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.20G172800	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
LOC_Os08g43210	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os10g25170	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_436575g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
PSME_00005183-RA	No alias	(at5g47220 : 92.8) Encodes a member of the ERF (ethylene...	0.03	Orthogroups_2024-Update
PSME_00005185-RA	No alias	(at4g17500 : 105.0) Encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00005187-RA	No alias	(at4g17500 : 144.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00037661-RA	No alias	(at4g17500 : 149.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00039617-RA	No alias	(at4g17500 : 120.0) Encodes a member of the ERF...	0.03	Orthogroups_2024-Update
Potri.002G141200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.002G201600	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.004G141200	No alias	redox responsive transcription factor 1	0.03	Orthogroups_2024-Update
Potri.006G054500	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.006G218200	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.007G046500	No alias	DREB and EAR motif protein 2	0.02	Orthogroups_2024-Update
Potri.008G091300	No alias	related to AP2 11	0.06	Orthogroups_2024-Update
Potri.009G101900	No alias	redox responsive transcription factor 1	0.02	Orthogroups_2024-Update
Potri.011G056900	No alias	ERF domain protein 12	0.02	Orthogroups_2024-Update
Potri.014G055700	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.014G099900	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.014G126100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.018G085700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.019G073300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Pp1s138_190V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s160_12V6	No alias	ap2 domain transcription factor	0.02	Orthogroups_2024-Update
Pp1s30_284V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s67_144V6	No alias	ap2 domain transcription factor	0.02	Orthogroups_2024-Update
Pp1s7_352V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.1G187800.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.1G188000.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.1G341100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.4G051200.1	No alias	subgroup ERF-V transcription factor	0.03	Orthogroups_2024-Update
Seita.4G180800.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Seita.6G181700.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Seita.9G500100.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G139400.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Sobic.002G212000.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Sobic.004G171300.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.005G014800.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.02	Orthogroups_2024-Update
Sobic.006G168000.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.010G089700.1	No alias	subgroup ERF-I transcription factor	0.02	Orthogroups_2024-Update
Solyc01g014720	No alias	Solanum lycopersicum Cytokinin Response Factor 7	0.03	Orthogroups_2024-Update
Solyc01g065980	No alias	Ethylene Response Factor E.4	0.03	Orthogroups_2024-Update
Solyc02g077370	No alias	Ethylene Response Factor C.5	0.03	Orthogroups_2024-Update
Solyc03g026270	No alias	CBF	0.02	Orthogroups_2024-Update
Solyc05g013540	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc05g051180	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.04	Orthogroups_2024-Update
Solyc08g078420	No alias	ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc09g066360	No alias	Ethylene Response Factor C.3	0.03	Orthogroups_2024-Update
Solyc10g050960	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.04	Orthogroups_2024-Update
Solyc11g042560	No alias	Ethylene-responsive transcription factor ERF021 family...	0.03	Orthogroups_2024-Update
Sopen02g033000	No alias	AP2 domain	0.04	Orthogroups_2024-Update
Sopen03g005140	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen03g005150	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen08g003200	No alias	AP2 domain	0.05	Orthogroups_2024-Update
Sopen10g030870	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen11g007720	No alias	AP2 domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	109	158

External Links

No external refs found!

Sopen04g006170

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation