Sopen04g006180

Description : Ribonucleotide reductase, barrel domain

Gene families : OG_42_0002341 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002341_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen04g006180
Cluster	HCCA clusters: Cluster_159

Target	Alias	Description	ECC score	Gene Family Method
Glyma.04G217300	No alias	ribonucleotide reductase 1	0.04	Orthogroups_2024-Update
Glyma.05G186900	No alias	ribonucleotide reductase 1	0.03	Orthogroups_2024-Update
Glyma.06G148500	No alias	ribonucleotide reductase 1	0.04	Orthogroups_2024-Update
HORVU7Hr1G027430.1	No alias	large subunit of ribonucleoside-diphosphate reductase...	0.02	Orthogroups_2024-Update
Kfl00489_0040	kfl00489_0040_v1.1	(at2g21790 : 1267.0) encodes large subunit of...	0.02	Orthogroups_2024-Update
MA_158556g0010	No alias	(at2g21790 : 1386.0) encodes large subunit of...	0.04	Orthogroups_2024-Update
PSME_00019285-RA	No alias	(at2g21790 : 1291.0) encodes large subunit of...	0.04	Orthogroups_2024-Update
Pp1s64_38V6	No alias	ribonucleoside-diphosphate reductase large subunit	0.02	Orthogroups_2024-Update
Seita.4G058800.1	No alias	large subunit of ribonucleoside-diphosphate reductase...	0.02	Orthogroups_2024-Update
Seita.5G216600.1	No alias	large subunit of ribonucleoside-diphosphate reductase...	0.03	Orthogroups_2024-Update
Sobic.010G054600.1	No alias	large subunit of ribonucleoside-diphosphate reductase...	0.03	Orthogroups_2024-Update
Solyc04g012060	No alias	Ribonucleoside-diphosphate reductase (AHRD V3.3 *** K4BPQ8_SOLLC)	0.06	Orthogroups_2024-Update
Solyc04g051350	No alias	Ribonucleoside-diphosphate reductase (AHRD V3.3 *** K4BS95_SOLLC)	0.02	Orthogroups_2024-Update
evm.model.contig_2144.6	No alias	(at2g21790 : 1100.0) encodes large subunit of...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	InterProScan predictions
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	None	Extended
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	InterProScan predictions
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013509	RNR_lsu_N	142	212
IPR000788	RNR_lg_C	216	757
IPR005144	ATP-cone_dom	1	89

External Links

No external refs found!

Sopen04g006180

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation