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  5. Sopen04g006680

Sopen04g006680


Description : AP2 domain


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g006680
Cluster HCCA clusters: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
A4A49_40092 No alias ethylene-responsive transcription factor crf2 0.03 Orthogroups_2024-Update
A4A49_42272 No alias ethylene-responsive transcription factor 4 0.03 Orthogroups_2024-Update
AC209257.4_FG006 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
At3g57600 No alias Dehydration-responsive element-binding protein 2F... 0.02 Orthogroups_2024-Update
At4g25490 No alias DRE/CRT-binding factor 1 [Source:UniProtKB/TrEMBL;Acc:B6DTR3] 0.02 Orthogroups_2024-Update
Bradi1g23756 No alias related to AP2 11 0.02 Orthogroups_2024-Update
Brara.C00211.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.02 Orthogroups_2024-Update
Brara.E00471.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Brara.E00692.1 No alias subgroup ERF-IV/DREB2 transcription factor 0.02 Orthogroups_2024-Update
Brara.F00133.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Brara.F01050.1 No alias cutin and suberin biosynthesis transcription factor... 0.02 Orthogroups_2024-Update
Brara.G00807.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Brara.I03370.1 No alias subgroup ERF-I transcription factor 0.04 Orthogroups_2024-Update
Glyma.02G267400 No alias ethylene responsive element binding factor 3 0.02 Orthogroups_2024-Update
Glyma.07G114000 No alias ethylene-responsive element binding factor 13 0.02 Orthogroups_2024-Update
Glyma.19G163900 No alias ethylene response factor 1 0.03 Orthogroups_2024-Update
HORVU6Hr1G062380.3 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
LOC_Os02g42585 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g43970 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10274g0010 No alias (at5g13330 : 108.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
MA_5280013g0010 No alias (at1g74930 : 121.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
MA_96512g0020 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00005185-RA No alias (at4g17500 : 105.0) Encodes a member of the ERF... 0.03 Orthogroups_2024-Update
PSME_00014384-RA No alias (at5g21960 : 93.6) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00051454-RA No alias (at1g19210 : 98.6) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
PSME_00051455-RA No alias (at5g21960 : 102.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
Potri.002G094200 No alias related to AP2 4 0.02 Orthogroups_2024-Update
Potri.003G150800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.012G108500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.014G046800 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
Potri.015G023200 No alias cytokinin response factor 4 0.04 Orthogroups_2024-Update
Potri.019G088000 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Potri.T050600 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Seita.3G278500.1 No alias transcription factor *(ABI4) & subgroup ERF-IV/DREB2... 0.02 Orthogroups_2024-Update
Seita.4G041600.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
Seita.9G320700.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Solyc01g065980 No alias Ethylene Response Factor E.4 0.03 Orthogroups_2024-Update
Solyc01g108240 No alias Ethylene Response Factor D.3 0.02 Orthogroups_2024-Update
Solyc04g012050 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc10g080310 No alias Dehydration responsive element binding transcription... 0.03 Orthogroups_2024-Update
Sopen03g033540 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen05g030600 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen12g003310 No alias AP2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 110 160
No external refs found!