Sopen04g008800


Description : RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)


Gene families : OG_42_0004018 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004018_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g008800
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
A4A49_15347 No alias zinc finger ccch domain-containing protein 40 0.02 Orthogroups_2024-Update
Brara.H02930.1 No alias component *(MAC5) of non-snRNP MOS4-associated complex 0.03 Orthogroups_2024-Update
Pp1s84_297V6 No alias pre-mrna-splicing factor slt11 0.02 Orthogroups_2024-Update
Sobic.004G263900.1 No alias component *(MAC5) of non-snRNP MOS4-associated complex 0.03 Orthogroups_2024-Update
Solyc04g017710 No alias Zinc finger transcription factor 32 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 230 288
IPR032297 Torus 148 194
No external refs found!