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  5. Solyc02g061840

Solyc02g061840


Description : RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* AT4G35785.2)


Gene families : OG_42_0001263 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g061840
Cluster HCCA clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Pp1s3_167V6 No alias arginine serine-rich-splicing 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000940 condensed chromosome outer kinetochore IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
CC GO:0005874 microtubule IEP Predicted GO
CC GO:0005876 spindle microtubule IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
BP GO:0051301 cell division IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
CC GO:0099080 supramolecular complex IEP Predicted GO
CC GO:0099081 supramolecular polymer IEP Predicted GO
CC GO:0099512 supramolecular fiber IEP Predicted GO
CC GO:0099513 polymeric cytoskeletal fiber IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 63 132
No external refs found!