Sopen04g014260

Description : Zinc knuckle

Gene families : OG_42_0001477 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001477_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen04g014260
Cluster	HCCA clusters: Cluster_203

Target	Alias	Description	ECC score	Gene Family Method
Brara.I01436.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Glyma.07G166100	No alias	Function unknown	0.02	Orthogroups_2024-Update
Glyma.18G150700	No alias	Function unknown	0.03	Orthogroups_2024-Update
Glyma.18G156400	No alias	Function unknown	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001878	Znf_CCHC	363	379

External Links

No external refs found!