Sopen04g015220


Description : Reverse transcriptase (RNA-dependent DNA polymerase)


Gene families : OG_42_0000004 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g015220
Cluster HCCA clusters: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Mp8g07960.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update
Sopen07g011160 No alias Reverse transcriptase (RNA-dependent DNA polymerase) 0.03 Orthogroups_2024-Update
Sopen09g023250 No alias Retroviral aspartyl protease 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 1234 1345
IPR005162 Retrotrans_gag_dom 137 233
IPR000477 RT_dom 694 854
No external refs found!