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  5. Sopen04g016230

Sopen04g016230


Description : Retrotransposon gag protein


Gene families : OG_42_0001421 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001421_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g016230
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Solyc01g028970 No alias No description available 0.03 Orthogroups_2024-Update
Solyc03g013360 No alias No description available 0.02 Orthogroups_2024-Update
Solyc03g051630 No alias No description available 0.03 Orthogroups_2024-Update
Sopen05g013260 No alias Retroviral aspartyl protease 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 111 207
No external refs found!