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  5. Sopen04g016440

Sopen04g016440


Description : MULE transposase domain


Gene families : OG_42_0000103 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000103_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g016440
Cluster HCCA clusters: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
LOC_Os10g38750 No alias transposon protein, putative, Mutator sub-class, expressed 0.02 Orthogroups_2024-Update
Solyc01g034110 No alias No description available 0.03 Orthogroups_2024-Update
Solyc01g057890 No alias No description available 0.03 Orthogroups_2024-Update
Solyc06g051280 No alias No description available 0.03 Orthogroups_2024-Update
Solyc10g039300 No alias No description available 0.02 Orthogroups_2024-Update
Solyc10g055510 No alias No description available 0.03 Orthogroups_2024-Update
Sopen01g014170 No alias MULE transposase domain 0.03 Orthogroups_2024-Update
Sopen05g027300 No alias MULE transposase domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 381 407
IPR018289 MULE_transposase_dom 129 223
No external refs found!