Sopen04g018450


Description : XRN 5'-3' exonuclease N-terminus


Gene families : OG_42_0000619 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000619_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g018450
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
Glyma.20G228700 No alias exoribonuclease 4 0.03 Orthogroups_2024-Update
LOC_Os01g65220 No alias XRN 5'-3' exonuclease N-terminus domain containing... 0.02 Orthogroups_2024-Update
LOC_Os03g58060 No alias XRN 5'-3' exonuclease N-terminus domain containing... 0.03 Orthogroups_2024-Update
PSME_00023220-RA No alias (at1g75660 : 196.0) Encodes a protein with similarity to... 0.02 Orthogroups_2024-Update
PSME_00039774-RA No alias (at1g75660 : 246.0) Encodes a protein with similarity to... 0.02 Orthogroups_2024-Update
Solyc04g049010 No alias ethylene insensitive 5/7 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004527 exonuclease activity IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004859 Put_53exo 1 249
No external refs found!