1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g062550

Solyc02g062550


Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** AT3G50940.1)


Gene families : OG_42_0000080 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g062550
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
413575 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
75451 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
A4A49_03924 No alias aaa-atpase 0.09 Orthogroups_2024-Update
A4A49_11121 No alias aaa-atpase 0.04 Orthogroups_2024-Update
A4A49_21385 No alias protein hyper-sensitivity-related 4 0.04 Orthogroups_2024-Update
A4A49_32189 No alias protein hyper-sensitivity-related 4 0.02 Orthogroups_2024-Update
A4A49_33756 No alias protein hyper-sensitivity-related 4 0.08 Orthogroups_2024-Update
At5g17750 No alias AAA-ATPase At5g17750 [Source:UniProtKB/Swiss-Prot;Acc:F4KID5] 0.04 Orthogroups_2024-Update
At5g57480 No alias AAA-ATPase At5g57480 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKM3] 0.03 Orthogroups_2024-Update
Bradi1g54800 No alias AAA-ATPase 1 0.04 Orthogroups_2024-Update
Bradi4g00440 No alias AAA-ATPase 1 0.03 Orthogroups_2024-Update
Bradi4g00460 No alias AAA-ATPase 1 0.02 Orthogroups_2024-Update
Bradi4g30930 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Brara.F03143.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.J01782.1 No alias Unknown function 0.04 Orthogroups_2024-Update
GRMZM2G138770 No alias AAA-ATPase 1 0.03 Orthogroups_2024-Update
GRMZM5G893912 No alias AAA-ATPase 1 0.04 Orthogroups_2024-Update
Glyma.02G053600 No alias cytochrome BC1 synthesis 0.04 Orthogroups_2024-Update
Glyma.11G071700 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Glyma.13G066100 No alias AAA-ATPase 1 0.02 Orthogroups_2024-Update
Glyma.15G268000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Glyma.18G254100 No alias AAA-ATPase 1 0.03 Orthogroups_2024-Update
HORVU5Hr1G019820.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G066780.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G124260.3 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os01g19260 No alias ATPase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10426157g0010 No alias (at4g25835 : 328.0) P-loop containing nucleoside... 0.03 Orthogroups_2024-Update
MA_10430798g0020 No alias (at3g28510 : 153.0) P-loop containing nucleoside... 0.05 Orthogroups_2024-Update
MA_10435321g0030 No alias (at5g57480 : 180.0) P-loop containing nucleoside... 0.04 Orthogroups_2024-Update
MA_16312g0010 No alias (at5g40010 : 192.0) AAA-ATPase 1 (AATP1); FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
MA_165229g0020 No alias (at4g25835 : 368.0) P-loop containing nucleoside... 0.03 Orthogroups_2024-Update
MA_23842g0010 No alias (at5g40010 : 366.0) AAA-ATPase 1 (AATP1); FUNCTIONS IN:... 0.04 Orthogroups_2024-Update
MA_296237g0010 No alias (at5g57480 : 91.7) P-loop containing nucleoside... 0.03 Orthogroups_2024-Update
MA_354684g0010 No alias (at3g28510 : 341.0) P-loop containing nucleoside... 0.04 Orthogroups_2024-Update
MA_39416g0010 No alias (at3g28510 : 238.0) P-loop containing nucleoside... 0.02 Orthogroups_2024-Update
MA_470606g0010 No alias (at5g57480 : 194.0) P-loop containing nucleoside... 0.02 Orthogroups_2024-Update
MA_5780742g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_69227g0010 No alias (at5g57480 : 537.0) P-loop containing nucleoside... 0.03 Orthogroups_2024-Update
PSME_00011755-RA No alias (at4g30250 : 365.0) P-loop containing nucleoside... 0.02 Orthogroups_2024-Update
PSME_00011756-RA No alias (at4g30250 : 363.0) P-loop containing nucleoside... 0.02 Orthogroups_2024-Update
PSME_00036828-RA No alias (at5g40010 : 369.0) AAA-ATPase 1 (AATP1); FUNCTIONS IN:... 0.02 Orthogroups_2024-Update
PSME_00045245-RA No alias (at5g40010 : 174.0) AAA-ATPase 1 (AATP1); FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
PSME_00056372-RA No alias (at5g57480 : 614.0) P-loop containing nucleoside... 0.03 Orthogroups_2024-Update
Potri.004G012500 No alias AAA-ATPase 1 0.05 Orthogroups_2024-Update
Potri.004G091300 No alias AAA-ATPase 1 0.08 Orthogroups_2024-Update
Potri.005G119200 No alias P-loop containing nucleoside triphosphate hydrolases... 0.06 Orthogroups_2024-Update
Potri.007G012400 No alias cytochrome BC1 synthesis 0.03 Orthogroups_2024-Update
Potri.007G020500 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 Orthogroups_2024-Update
Potri.007G020900 No alias cytochrome BC1 synthesis 0.05 Orthogroups_2024-Update
Potri.008G177200 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Potri.009G024400 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Potri.T172000 No alias cytochrome BC1 synthesis 0.05 Orthogroups_2024-Update
Pp1s325_27V6 No alias atp binding 0.02 Orthogroups_2024-Update
Seita.2G069800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G213800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.2G333200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G333400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.3G124600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.3G407200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.4G245200.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.5G218000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G358900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G051600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G331301.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G319900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G191300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.010G247300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc02g087530 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Solyc03g033840 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Sopen02g013560 No alias Domain associated at C-terminal with AAA 0.04 Orthogroups_2024-Update
Sopen02g018900 No alias ATPase family associated with various cellular activities (AAA) 0.02 Orthogroups_2024-Update
Sopen02g029570 No alias Domain associated at C-terminal with AAA 0.03 Orthogroups_2024-Update
Sopen03g006600 No alias Domain associated at C-terminal with AAA 0.03 Orthogroups_2024-Update
Sopen04g034270 No alias Domain associated at C-terminal with AAA 0.04 Orthogroups_2024-Update
Sopen10g003100 No alias Domain associated at C-terminal with AAA 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006570 tyrosine metabolic process IEP Predicted GO
BP GO:0006571 tyrosine biosynthetic process IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 36 127
IPR003959 ATPase_AAA_core 255 389
No external refs found!