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  5. Sopen04g020030

Sopen04g020030


Description : MULE transposase domain


Gene families : OG_42_0000284 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g020030
Cluster HCCA clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Solyc01g059970 No alias No description available 0.02 Orthogroups_2024-Update
Solyc02g014710 No alias No description available 0.03 Orthogroups_2024-Update
Solyc08g043220 No alias No description available 0.02 Orthogroups_2024-Update
Sopen01g020720 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen05g002620 No alias MuDR family transposase 0.03 Orthogroups_2024-Update
Sopen05g008970 No alias MuDR family transposase 0.05 Orthogroups_2024-Update
Sopen06g017430 No alias MULE transposase domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007527 Znf_SWIM 581 612
IPR004332 Transposase_MuDR 136 191
IPR018289 MULE_transposase_dom 336 430
No external refs found!