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Sopen04g022050


Description : Violaxanthin de-epoxidase (VDE)


Gene families : OG_42_0008921 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008921_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g022050
Cluster HCCA clusters: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
A4A49_34181 No alias violaxanthin de-epoxidase, chloroplastic 0.03 Orthogroups_2024-Update
Bradi5g07390 No alias non-photochemical quenching 1 0.02 Orthogroups_2024-Update
Seita.7G067200.1 No alias violaxanthin de-epoxidase *(VDE) & violaxanthin... 0.03 Orthogroups_2024-Update
Sobic.006G049200.1 No alias violaxanthin de-epoxidase *(VDE) & violaxanthin... 0.03 Orthogroups_2024-Update
Solyc04g050930 No alias violaxanthin de-epoxidase 0.12 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEA InterProScan predictions
MF GO:0046422 violaxanthin de-epoxidase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010788 VDE 140 380
No external refs found!