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  5. Sopen04g023150

Sopen04g023150


Description : ABC transporter


Gene families : OG_42_0004906 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004906_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g023150
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
A4A49_34014 No alias abc transporter f family member 5 0.04 Orthogroups_2024-Update
At5g64840 No alias GCN5 [Source:UniProtKB/TrEMBL;Acc:A0A178UAA3] 0.09 Orthogroups_2024-Update
Bradi4g14020 No alias general control non-repressible 5 0.04 Orthogroups_2024-Update
Brara.B03917.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Cre08.g372250 No alias general control non-repressible 5 0.02 Orthogroups_2024-Update
GRMZM2G105570 No alias general control non-repressible 5 0.03 Orthogroups_2024-Update
Glyma.04G218900 No alias general control non-repressible 5 0.08 Orthogroups_2024-Update
Glyma.06G146900 No alias general control non-repressible 5 0.06 Orthogroups_2024-Update
LOC_Os11g39020 No alias ABC transporter, ATP-binding protein, putative, expressed 0.08 Orthogroups_2024-Update
MA_10437027g0010 No alias (at5g64840 : 749.0) member of GCN subfamily; general... 0.02 Orthogroups_2024-Update
Mp7g11090.1 No alias ABC transporter F family member 5 OS=Arabidopsis... 0.03 Orthogroups_2024-Update
Potri.007G080600 No alias general control non-repressible 5 0.03 Orthogroups_2024-Update
Pp1s125_77V6 No alias abc transporter family protein 0.04 Orthogroups_2024-Update
Pp1s495_14V6 No alias abc transporter family protein 0.04 Orthogroups_2024-Update
Seita.8G181700.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sobic.005G179300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc04g051800 No alias ABC transporter family protein (AHRD V3.3 *** AT5G09930.1) 0.18 Orthogroups_2024-Update
evm.model.contig_2122.16 No alias (at5g09930 : 522.0) member of GCN subfamily; GENERAL... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 444 575
IPR032781 ABC_tran_Xtn 330 417
IPR003439 ABC_transporter-like 116 291
No external refs found!