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  5. Sopen04g023880

Sopen04g023880


Description : AUX/IAA family


Gene families : OG_42_0000083 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g023880
Cluster HCCA clusters: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
Brara.H00761.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
HORVU5Hr1G094240.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Sopen06g003360 No alias AUX/IAA family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 356 384
IPR002885 Pentatricopeptide_repeat 386 414
IPR002885 Pentatricopeptide_repeat 193 217
IPR002885 Pentatricopeptide_repeat 327 349
IPR002885 Pentatricopeptide_repeat 223 248
IPR002885 Pentatricopeptide_repeat 251 299
IPR033389 AUX/IAA_dom 116 162
IPR033389 AUX/IAA_dom 34 115
No external refs found!