1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc01g010080

Solyc01g010080


Description : Potassium channel (AHRD V3.3 *** B6ECZ4_TOBAC)


Gene families : OG_42_0000182 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000182_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g010080
Cluster HCCA clusters: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
HORVU7Hr1G040880.6 No alias voltage-gated potassium cation channel *(AKT/SKOR/GORK) 0.06 Orthogroups_2024-Update
evm.model.tig00021517.5 No alias (at3g02850 : 124.0) Encodes SKOR, a member of Shaker... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004129 cytochrome-c oxidase activity IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
BP GO:0009060 aerobic respiration IEP Predicted GO
MF GO:0015002 heme-copper terminal oxidase activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predicted GO
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0045333 cellular respiration IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR021789 KHA_dom 562 627
IPR005821 Ion_trans_dom 68 316
IPR000595 cNMP-bd_dom 407 490
No external refs found!