Description : PPR repeat family
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Sopen04g026190 | |
Cluster | HCCA clusters: Cluster_225 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_18851 | No alias | pentatricopeptide repeat-containing protein | 0.02 | Orthogroups_2024-Update | |
At1g03510 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Orthogroups_2024-Update | |
Bradi4g40340 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.02G043900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.09G236700 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.09G286100 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.11G006200 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.18G085900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Glyma.20G200067 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU2Hr1G035330.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
HORVU4Hr1G064880.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
LOC_Os01g72930 | No alias | pentatricopeptide, putative, expressed | 0.03 | Orthogroups_2024-Update | |
MA_16339g0010 | No alias | (at3g57430 : 548.0) Encodes a chloroplast RNA editing... | 0.05 | Orthogroups_2024-Update | |
PSME_00011140-RA | No alias | (at1g11290 : 575.0) Pentatricopeptide Repeat Protein... | 0.02 | Orthogroups_2024-Update | |
PSME_00021884-RA | No alias | (at2g27610 : 613.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
PSME_00022685-RA | No alias | (at3g46790 : 552.0) Encodes a member of a PCMP (plant... | 0.03 | Orthogroups_2024-Update | |
PSME_00024530-RA | No alias | (at4g18750 : 707.0) Encodes a pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
PSME_00024580-RA | No alias | (at4g02750 : 440.0) Tetratricopeptide repeat (TPR)-like... | 0.04 | Orthogroups_2024-Update | |
PSME_00028519-RA | No alias | (at2g22070 : 606.0) pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
PSME_00032959-RA | No alias | (at3g46790 : 529.0) Encodes a member of a PCMP (plant... | 0.03 | Orthogroups_2024-Update | |
PSME_00044871-RA | No alias | (at2g39620 : 426.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
PSME_00048581-RA | No alias | (at4g02750 : 590.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
PSME_00056168-RA | No alias | (at3g61170 : 686.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
PSME_00057187-RA | No alias | (at1g11290 : 659.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
Potri.010G161800 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.013G089400 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
Seita.7G277600.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.001G069300.2 | No alias | RNA editing factor *(DEK36) | 0.03 | Orthogroups_2024-Update | |
Sobic.001G149100.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.001G212200.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.002G084400.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.002G111700.6 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.002G172500.3 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.002G358900.3 | No alias | RNA editing factor *(OTP90) | 0.02 | Orthogroups_2024-Update | |
Sobic.002G385200.1 | No alias | Unknown function | 0.05 | Orthogroups_2024-Update | |
Sobic.002G389200.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.003G047400.1 | No alias | RNA editing factor *(OTP81) | 0.05 | Orthogroups_2024-Update | |
Sobic.003G119100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.003G237100.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.003G333200.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.004G051600.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.004G053100.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.004G217900.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Sobic.004G312000.1 | No alias | RNA editing factor *(CLB19) | 0.04 | Orthogroups_2024-Update | |
Sobic.006G069100.3 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.006G146400.4 | No alias | RNA editing factor *(MEF12) | 0.02 | Orthogroups_2024-Update | |
Sobic.007G208400.1 | No alias | RNA editing factor *(REME1) | 0.02 | Orthogroups_2024-Update | |
Sobic.008G009000.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.009G136200.1 | No alias | RNA editing factor *(MEF32) | 0.03 | Orthogroups_2024-Update | |
Sobic.009G155400.3 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Sobic.009G241200.3 | No alias | RNA editing factor *(ECB2/VAC1) | 0.02 | Orthogroups_2024-Update | |
Solyc01g006920 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Solyc01g020340 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
Solyc01g081290 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Solyc01g081560 | No alias | LOW QUALITY:Pentatricopeptide repeat-containing protein... | 0.02 | Orthogroups_2024-Update | |
Solyc01g090510 | No alias | Pentatricopeptide repeat-containing protein, putative... | 0.02 | Orthogroups_2024-Update | |
Solyc01g091610 | No alias | LOW QUALITY:Pentatricopeptide repeat-containing protein... | 0.03 | Orthogroups_2024-Update | |
Solyc01g094850 | No alias | Pentatricopeptide repeat superfamily protein, putative... | 0.04 | Orthogroups_2024-Update | |
Solyc01g100800 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.04 | Orthogroups_2024-Update | |
Solyc03g093630 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Solyc03g097850 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Solyc04g064750 | No alias | Pentatricopeptide repeat superfamily protein (AHRD V3.3... | 0.04 | Orthogroups_2024-Update | |
Solyc06g084580 | No alias | Pentatricopeptide repeat-containing protein family (AHRD... | 0.03 | Orthogroups_2024-Update | |
Solyc07g042760 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
Solyc07g055310 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Solyc09g009950 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.05 | Orthogroups_2024-Update | |
Solyc09g010070 | No alias | Pentatricopeptide repeat superfamily protein (AHRD V3.3... | 0.06 | Orthogroups_2024-Update | |
Solyc10g008570 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Solyc11g005970 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Solyc11g006700 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
Solyc11g011860 | No alias | Pentatricopeptide repeat-containing protein family (AHRD... | 0.03 | Orthogroups_2024-Update | |
Solyc11g067210 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.04 | Orthogroups_2024-Update | |
Solyc11g071370 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.06 | Orthogroups_2024-Update | |
Solyc12g042400 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |