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  5. Sopen04g026250

Sopen04g026250


Description : PPR repeat family


Gene families : OG_42_0009565 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009565_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g026250
Cluster HCCA clusters: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
Glyma.04G243200 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.4G122400.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 179 202
IPR002885 Pentatricopeptide_repeat 379 405
IPR002885 Pentatricopeptide_repeat 310 336
IPR002885 Pentatricopeptide_repeat 444 471
IPR002885 Pentatricopeptide_repeat 408 437
IPR002885 Pentatricopeptide_repeat 205 252
IPR002885 Pentatricopeptide_repeat 109 149
No external refs found!