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  5. Sopen04g026890

Sopen04g026890


Description : Dof domain, zinc finger


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g026890
Cluster HCCA clusters: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
A4A49_35213 No alias dof zinc finger protein dof1.7 0.03 Orthogroups_2024-Update
At4g00940 No alias Dof zinc finger protein DOF4.1... 0.03 Orthogroups_2024-Update
Brara.J01378.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
GRMZM2G064655 No alias TARGET OF MONOPTEROS 6 0.02 Orthogroups_2024-Update
Glyma.03G007950 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Glyma.10G082000 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.17G180600 No alias Dof-type zinc finger DNA-binding family protein 0.05 Orthogroups_2024-Update
Glyma.18G150800 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Glyma.18G260500 No alias cycling DOF factor 2 0.03 Orthogroups_2024-Update
HORVU3Hr1G116220.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
LOC_Os03g42200 No alias dof zinc finger domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00028077-RA No alias (at5g39660 : 211.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
Potri.004G046600 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Pp1s26_282V6 No alias zinc finger 0.03 Orthogroups_2024-Update
Seita.1G290700.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Seita.9G206300.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Sobic.001G078700.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Sobic.003G131100.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.007G223200.2 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Sopen11g025790 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 14 70
No external refs found!