Sopen04g026940

Description : BED zinc finger

Gene families : OG_42_0002063 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002063_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen04g026940
Cluster	HCCA clusters: Cluster_397

Target	Alias	Description	ECC score	Gene Family Method
A4A49_10667	No alias	hypothetical protein	0.03	Orthogroups_2024-Update
Bradi4g41942	No alias	RING/FYVE/PHD zinc finger superfamily protein	0.03	Orthogroups_2024-Update
Pp1s77_18V6	No alias	phd-finger family expressed	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003656	Znf_BED	198	248
IPR003656	Znf_BED	297	347

External Links

No external refs found!