Sopen04g026970

Description : U-box domain

Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen04g026970
Cluster	HCCA clusters: Cluster_293

Target	Alias	Description	ECC score	Gene Family Method
At3g18710	No alias	RING-type E3 ubiquitin transferase...	0.04	Orthogroups_2024-Update
Glyma.06G154100	No alias	plant U-box 22	0.03	Orthogroups_2024-Update
Glyma.11G214500	No alias	CYS, MET, PRO, and GLY protein 1	0.04	Orthogroups_2024-Update
Kfl00376_0010	kfl00376_0010_v1....	(at2g28830 : 87.8) PLANT U-BOX 12 (PUB12); FUNCTIONS IN:...	0.02	Orthogroups_2024-Update
LOC_Os02g34410	No alias	U-box domain-containing protein, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os03g13740	No alias	immediate-early fungal elicitor protein CMPG1, putative,...	0.02	Orthogroups_2024-Update
MA_200041g0010	No alias	(at3g19380 : 209.0) plant U-box 25 (PUB25); FUNCTIONS...	0.03	Orthogroups_2024-Update
MA_311559g0010	No alias	(at3g52450 : 124.0) Encodes a cytoplasmically localized...	0.02	Orthogroups_2024-Update
Seita.1G186200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.7G094300.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
Solyc01g007000	No alias	U-box domain-containing family protein (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update
Solyc06g074140	No alias	LOW QUALITY:U-box domain-containing family protein (AHRD...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	2	61

External Links

No external refs found!