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  5. Sopen04g027720

Sopen04g027720


Description : Tub family


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g027720
Cluster HCCA clusters: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
83983 No alias tubby like protein 3 0.03 Orthogroups_2024-Update
Bradi2g24110 No alias tubby like protein 10 0.03 Orthogroups_2024-Update
Bradi3g13080 No alias tubby like protein 10 0.02 Orthogroups_2024-Update
GRMZM2G001272 No alias tubby like protein 10 0.02 Orthogroups_2024-Update
Glyma.02G055300 No alias tubby like protein 2 0.04 Orthogroups_2024-Update
Glyma.07G147700 No alias tubby like protein 1 0.02 Orthogroups_2024-Update
Glyma.07G251800 No alias tubby like protein 3 0.04 Orthogroups_2024-Update
Glyma.13G269600 No alias tubby like protein 7 0.02 Orthogroups_2024-Update
Glyma.17G022700 No alias tubby like protein 3 0.02 Orthogroups_2024-Update
HORVU1Hr1G076900.2 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
HORVU4Hr1G020110.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
Kfl00327_0070 kfl00327_0070_v1.... (at1g25280 : 394.0) Member of TLP family; tubby like... 0.02 Orthogroups_2024-Update
LOC_Os02g47640 No alias OsFBT4 - F-box and tubby domain containing protein, expressed 0.02 Orthogroups_2024-Update
Potri.001G390200 No alias tubby like protein 7 0.02 Orthogroups_2024-Update
Potri.005G121600 No alias tubby like protein 2 0.02 Orthogroups_2024-Update
Pp1s222_25V6 No alias No description available 0.03 Orthogroups_2024-Update
Pp1s25_366V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.5G393600.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
Seita.7G062600.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Seita.7G293600.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
Solyc04g071440 No alias Tubby-like F-box protein (AHRD V3.3 *** K4BTD6_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001810 F-box_dom 53 105
IPR000007 Tubby_C 116 395
No external refs found!