Sopen04g028080


Description : S1 RNA binding domain


Gene families : OG_42_0005893 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005893_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g028080
Cluster HCCA clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Bradi2g18650 No alias Nucleic acid-binding proteins superfamily 0.02 Orthogroups_2024-Update
Glyma.10G220900 No alias Nucleic acid-binding proteins superfamily 0.03 Orthogroups_2024-Update
Glyma.16G161600 No alias Nucleic acid-binding proteins superfamily 0.03 Orthogroups_2024-Update
HORVU1Hr1G080410.11 No alias mRNA chaperone *(RLSB/BSF) 0.03 Orthogroups_2024-Update
Seita.3G165500.1 No alias mRNA chaperone *(RLSB/BSF) 0.05 Orthogroups_2024-Update
Seita.5G209000.1 No alias mRNA chaperone *(RLSB/BSF) 0.06 Orthogroups_2024-Update
Sobic.009G212000.1 No alias mRNA chaperone *(RLSB/BSF) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003029 S1_domain 369 429
IPR003029 S1_domain 292 358
No external refs found!