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  5. Sopen04g028090

Sopen04g028090


Description : Leucine Rich repeats (2 copies)


Gene families : OG_42_0000035 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g028090
Cluster HCCA clusters: Cluster_337

Target Alias Description ECC score Gene Family Method Actions
164315 No alias HAESA-like 1 0.03 Orthogroups_2024-Update
A4A49_08323 No alias receptor-like protein kinase haiku2 0.04 Orthogroups_2024-Update
Bradi1g37190 No alias Leucine-rich receptor-like protein kinase family protein 0.03 Orthogroups_2024-Update
Brara.E01934.1 No alias LRR-XI protein kinase & RGF-peptide receptor *(RGFR) &... 0.02 Orthogroups_2024-Update
Brara.I05244.1 No alias PIP/PIPL peptide receptor *(RLK7) & LRR-XI protein... 0.02 Orthogroups_2024-Update
Glyma.20G170900 No alias Leucine-rich receptor-like protein kinase family protein 0.05 Orthogroups_2024-Update
MA_944190g0010 No alias (at5g25930 : 721.0) Protein kinase family protein with... 0.03 Orthogroups_2024-Update
Potri.019G078400 No alias Leucine-rich receptor-like protein kinase family protein 0.03 Orthogroups_2024-Update
Pp1s141_73V6 No alias leucine-rich repeat transmembrane protein 0.02 Orthogroups_2024-Update
Solyc03g006300 No alias Receptor-like protein kinase HSL1 (AHRD V3.3 *** HSL1_ARATH) 0.02 Orthogroups_2024-Update
evm.model.tig00020918.12 No alias (at1g67890 : 126.0) PAS domain-containing protein... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 661 676
IPR013210 LRR_N_plant-typ 38 81
IPR000719 Prot_kinase_dom 792 1059
IPR001611 Leu-rich_rpt 543 602
IPR001611 Leu-rich_rpt 110 168
IPR001611 Leu-rich_rpt 400 458
No external refs found!