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  5. Sopen04g028690

Sopen04g028690


Description : mTERF


Gene families : OG_42_0000078 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g028690
Cluster HCCA clusters: Cluster_412

Target Alias Description ECC score Gene Family Method Actions
Bradi1g16160 No alias Mitochondrial transcription termination factor family protein 0.02 Orthogroups_2024-Update
Brara.C04011.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
Brara.I01450.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G012999 No alias Mitochondrial transcription termination factor family protein 0.02 Orthogroups_2024-Update
HORVU2Hr1G024310.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G075340.1 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update
PSME_00032600-RA No alias (at5g64950 : 90.5) Mitochondrial transcription... 0.02 Orthogroups_2024-Update
PSME_00056620-RA No alias (at1g79220 : 139.0) Mitochondrial transcription... 0.02 Orthogroups_2024-Update
Potri.001G034500 No alias Mitochondrial transcription termination factor family protein 0.02 Orthogroups_2024-Update
Seita.3G247400.1 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update
Seita.4G092000.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
Seita.4G094400.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
Seita.4G095000.1 No alias mTERF-type transcription factor 0.02 Orthogroups_2024-Update
Seita.6G130600.1 No alias mTERF-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.002G179800.1 No alias mTERF-type transcription factor 0.03 Orthogroups_2024-Update
Solyc12g010650 No alias Mitochondrial transcription termination factor family... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003690 MTERF 188 359
IPR003690 MTERF 84 209
No external refs found!